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Publications

Grippenet: A New Tool for the Monitoring, Risk-Factor and Vaccination Coverage Analysis of Influenza-Like Illness in Switzerland

A. Richard, L. Mueller, A. Wisniak, A. Thiabaud, T. Merle, D. Dietrich, D. Paolotti, E. Jeannot, A. Flahault
MDPI Vaccines - Vaccination and Public Health: Optimizing Vaccine Uptake through the Application of Social and Behavioral Science Theory, Principles, and Strategies 8/3 (2020)

Changes in contact patterns shape the dynamics of the COVID-19 outbreak in China

J. Zhang, M. Litvinova, Y. Liang, Y. Wang, W. Wang, S. Zhao, Q. Wu, S. Merler, C. Viboud, A. Vespignani, M. Ajelli, H. Yu
Science 368/6498 (2020)

Gender gaps in urban mobility

L. E. Gauvin, M. Tizzoni, S. Piaggesi, A. Young, N. Adler, S. G. Verhulst, L. Ferres, C. Cattuto
Humanities and Social Sciences Communications 7/11 (2020)

Falling into the Echo Chamber: The Italian Vaccination Debate on Twitter

Proceedings of the Fourteenth International AAAI Conference on Web and Social Media 14(1) (2020)

Towards a data-driven characterization of behavioral changes induced by the seasonal flu

N. Gozzi, D. Perrotta, D. Paolotti, N. Perra
PLOS Computational Biology 16(5): e1007879 (2020)

Evolving epidemiology and transmission dynamics of coronavirus disease 2019 outside Hubei province, China: a descriptive and modelling study

J. Zhang, M. Litvinova, W. Wang, Y. Wang, L. Yi, X. Chen, Q. Wu, Y. Liang, X. Wang, J. Yang, K. Sun, I. Longini, M. E. Halloran, P. Wu, B. Cowling, S. Merler, C. Viboud, A. Vespignani, M. Ajelli, H. Yu
The Lancet Infectious Diseases (2020)

Mobile phone data for informing public health actions across the COVID-19 pandemic life cycle

N. Oliver, B. Lepri, H. Sterly, R. Lambiotte, S. Delataille, M. De Nadai, E. Letouzé, A. Ali Salah, R. Benjamins, C. Cattuto, V. Colizza, N. De Cordes, S. P. Fraiberger, T. Koebe, S. Lehmann, J. Murillo, A. Pentland, P. N. Pham, F. Pivetta, J. Saramäki, S. Scarpino, M. Tizzoni, S. Verhulst, P. Vinck
Science Advances eabc0764 (2020)

Facebook Ads as a Demographic Tool to Measure the Urban-Rural Divide

D. Rama, Y. Mejova, M. Tizzoni, K. Kalimeri, I. Weber
WWW '20: Proceedings of The Web Conference 2020, Taipei, Taiwan, April 2020 (2020)

Detecting critical slowing down in high-dimensional epidemiological systems

T. Brett, M. Ajelli, Q. Liu, M. G. Krauland, J. J. Grefenstette, W. G. Van Panhuis, A. Vespignani, J. Drake, P. Rohani
Plos Computational Biology 16 (3), e1007679 (2020)

The effect of travel restrictions on the spread of the 2019 novel coronavirus (COVID-19) outbreak

M. Chinazzi, J. Davis, M. Ajelli, C. Gioannini, M. Litvinova, S. Merler, A. Pastore Y Piontti, K. MU, L. Rossi, K. Sun, C. Viboud, X. Xiong, H. Yu, M. E. Halloran, I. Longini, A. Vespignani
Science eaba9757 (2020)

Modeling echo chambers and polarization dynamics in social networks

F. Baumann, P. Lorenz-Spreen, I. M. Solokov, M. Starnini
Physical Review Letters 124 (4), 048301 (2020)

Reports of the Workshops Held at the 2019 International AAAI Conference on Web and Social Media

D. Alburez-Gutierrez, E. Chandrasekharan, R. Chunara, S. Gil-Clavel, A. Hannak, R. Interdonato, K. Joseph, K. Kalimeri, M. M. Malik, K. Mayer, Y. Mejova, D. Paolotti, E. Zagheni
AI Magazine 40 (4) (2019)

Spatio-temporal Analysis of Flu-related Drugs Uptake in an Online Cohort in England

D. Perrotta, D. Paolotti, D. Delle Vedove, C. Obi, R. Pebody, R. Schifanella
Proceedings of the 9th International Conference on Digital Public Health (2019)

Digital Health Innovation: From Proof of Concept to Public Value

D. Paolotti, U. Shah, M. Edelstein, O. L. Neto, P. Kostkova, C. Wood
Proceedings of the 9th International Conference on Digital Public Health (2019)

Mapping the physics research space: a machine learning approach

M. Chinazzi, B. Goncalves, Q. Zhang, A. Vespignani
EPJ Data Science 8: 33 (2019)

Random walks in non-Poissoinan activity driven temporal networks

A. Moinet, M. Starnini, R. Pastor-Satorras
New Journal of Physics 21, 093032 (2019)

Predicting City Poverty Using Satellite Imagery

S. Piaggesi, L. E. Gauvin, M. Tizzoni, C. Cattuto, N. Adler, S. Verhulst, A. Young, R. Price, L. Ferres, A. Panisson
In Proceedings of the IEEE Conference on Computer Vision and Pattern Recognition Workshops (2019)

High-resolution contact networks of free-ranging domestic dogs Canis familiaris and implications for transmission of infection

J. K. Wilson-Aggarwal, L. Ozella, M. Tizzoni, C. Cattuto, G. J.F. Swan, T. Moundai, M. J. Silk, J. A. Zingeser, R. A. McDonald
Plos Neglected Tropical Diseases 13(7): e0007565 (2019)

Reactive school closure weakens the network of social interactions and reduces the spread of influenza

M. Litvinova, Q. Liu, E. S. Kulikov, M. Ajelli
PNAS - Proceedings of the National Academy of Sciences 116 (27) (2019)

Effect of Values and Technology Use on Exercise: Implications for Personalized Behavior Change Interventions

UMAP '19 Proceedings of the 27th ACM Conference on User Modeling, Adaptation and Personalization (2019)

Participatory Disease Surveillance Systems: Ethical Framework

L. D. Geneviève, A. Martani, T. Wangmo, D. Paolotti, C. Koppeschaar, C. Kjelsø, C. Guerrisi, M. Hirsch, O. Woolley-Meza, P. Lukowicz, A. Flahault, B. S. Elger
Journal of Medical Internet Research 21, 5 e12273 (2019)

Wearable Proximity Sensors for Monitoring a Mass Casualty Incident Exercise: Feasibility Study

L. Ozella, L. E. Gauvin, L. Carenzo, M. Quaggiotto, P. L. Ingrassia, M. Tizzoni, A. Panisson, D. Colombo, A. Sapienza, K. Kalimeri, F. Della Corte, C. Cattuto
Journal of Medical Internet Research 21, 4 e12251 (2019)

Unsupervised extraction of epidemic syndromes from participatory influenza surveillance self-reported symptoms

K. Kalimeri, M. Delfino, C. Cattuto, D. Perrotta, V. Colizza, C. Guerrisi, C. Turbelin, J. Duggan, J. Edmunds, C. Obi, R. Peabody, A. Franco, Y. Moreno, S. Meloni, C. Koppeschaar, C. Kjelsø, R. Mexia, D. Paolotti
PLOS Computational Biology 15(4): e1006173 (2019)

The future of influenza forecasts

C. Viboud, A. Vespignani
PNAS Proceedings of the National Academy of Sciences 116 (8) (2019)

Global flu view: a platform to connect crowdsourced disease surveillance around the world

A. W. Crawley, D. Paolotti, F. Dalton, J. S. Brownstein, M. Smolinski
International Journal of Infectious Diseases 79 (2019)

grippeNET App: Enhancing, Participatory Influenza Monitoring Through Mobile Phone Sensors

M. Hirsch, O. Woolley-Meza, D. Paolotti, A. Flahault, P. Lukowicz
Proceedings of UbiComp/ISWC’18 Adjunct (2018)

Charting the Next Pandemic: Modeling Infectious Disease Spreading in the Data Science Age

A. Pastore Y Piontti, N. Perra, L. Rossi, N. Samay, A. Vespignani, C. Gioannini, B. Goncalves, M. C. Gomes
Springer International Publishing (2018)

The RAPIDD Ebola forecasting challenge: Model description and synthetic data generation

M. Ajelli, Q. Zhang, K. Sun, S. Merler, L. Fumanelli, G. Chowell, L. Simonsen, C. Viboud, A. Vespignani
Epidemics 22 (2018)

Report on the 12th Russian Summer School in Information Retrieval (RuSSIR 2018)

Y. Mejova, E. Chernyak, E. Tutubalina, P. Braslavski
ACM SIGIR Forum 52 / 2 (2018)

Measurability of the epidemic reproduction number in data-driven contact networks

Q. Liu, M. Ajelli, A. Aleta, S. Merler, Y. Moreno, A. Vespignani
Proceedings of the National Academy of Sciences 115 (50), 12680-12685 (2018)

Fake Cures: User-centric Modeling of Health Misinformation in Social Media

A. Ghenai, Y. Mejova
Proceedings of the ACM on Human-Computer Interaction - CSCW 2 / CSCW (2018)

Quantifying the risk of local Zika virus transmission in the continental US during the 2015-2016 ZIKV epidemic

K. Sun, Q. Zhang, A. Pastore Y Piontti, M. Chinazzi, D. Mistry, N. E. Dean, D. P. Rojas, S. Merler, P. Poletti, L. Rossi, M. E. Halloran, I. Longini, A. Vespignani
BMC Medicine 16:195 (2018)

A Topological Data Analysis Approach to Influenza-Like-Illness

J. Costa, P. Skraba, D. Paolotti, R. Mexia
Proceedings of the ACM SIGKDD Workshop on Epidemiology meets Data Mining and Knowledge Discovery (epiDAMIK) (2018)

Close encounters between infants and household members measured through wearable proximity sensors

L. Ozella, F. Gesualdo, M. Tizzoni, C. Rizzo, E. Pandolfi, I. Campagna, A. E. Tozzi, C. Cattuto
Plos One 13(6):e0198733 (2018)

Science of science

S. Fortunato, C. T. Bergstrom, K. Börner, J. A. Evans, D. Helbing, S. Milojević, A. M. Petersen, F. Radicchi, R. Sinatra, B. Uzzi, A. Vespignani, L. Waltman, D. Wang, A. Barabási
Science 359 / 6379 (2018)

Self-Swabbing for Virological Confirmation of Influenza-Like Illness Among an Internet-Based Cohort in the UK During the 2014-2015 Flu Season: Pilot Study

C. Wenham, E. Gray, C. Keane, M. Donati, D. Paolotti, R. Pebody, E. Fragaszy, R. McKendry, J. Edmunds
J Med Internet Res 20,3 (2018)

Epidemic Threshold in Continuous-Time Evolving Networks

E. Valdano, M. Re Fiorentin, C. Poletto, V. Colizza
Phys. Rev. Lett. 120, 068302 (2018)

Resilience management during large-scale epidemic outbreaks

E. Massaro, A. Ganin, N. Perra, I. Linkov, A. Vespignani
Scientific Reports 8 / 1859 (2018)

Combining Participatory Influenza Surveillance with Modeling and Forecasting: Three Alternative Approaches

J. S. Brownstein, S. Chu, A. Marathe, M. V. Marathe, A. T. Nguyen, D. Paolotti, N. Perra, D. Perrotta, M. Santillana, S. Swarup, M. Tizzoni, A. Vespignani, A. K. Vullikanti, M. L. Wilson, Q. Zhang
JMIR Public Health and Surveillance 3, No 4 Oct-Dec (2017)

Vaccination and epidemics in networked populations —An introduction

Z. Wang, Y. Moreno, S. Boccaletti, M. Perc
Chaos, Solitons & Fractals 103 (2017)

The RAPIDD Ebola forecasting challenge: Model description and synthetic data generation

M. Aielli, Q. Zhang, K. Sun, S. Merler, L. Fumanelli, G. Chowell, L. Simonsen, C. Viboud, A. Vespignani
Epidemics 22 (2017)

Influenzanet: Citizens Among 10 Countries Collaborating to Monitor Influenza in Europe

C. Koppeschaar, V. Colizza, C. Guerrisi, C. Turbelin, J. Duggan, J. Edmunds, C. Kjelsø, R. Mexia, Y. Moreno, S. Meloni, D. Paolotti, D. Perrotta, E. van Straten, A. O Franco
JMIR Public Health and Surveillance 3(3):e66 (2017)

Robust Modeling of Human Contact Networks Across Different Scales and Proximity-Sensing Techniques

M. Starnini, B. Lepri, A. Baronchelli, A. Barrat, C. Cattuto, R. Pastor-Satorras
International Conference on Social Informatics SocInfo 2017: Social Informatics (2017)

Forecasting Seasonal Influenza Fusing Digital Indicators and a Mechanistic Disease Model

Q. Zhang, N. Perra, D. Perrotta, M. Tizzoni, D. Paolotti, A. Vespignani
Proceeding of the 26th International Conference on World Wide Web (WWW) (2017)

Using Participatory Web-based Surveillance Data to Improve Seasonal Influenza Forecasting in Italy

D. Perrotta, M. Tizzoni, D. Paolotti
Proceeding of the 26th International Conference on World Wide Web (WWW) (2017)

Spread of Zika virus in the Americas

Q. Zhang, K. Sun, M. Chinazzi, A. Pastore Y Piontti, N. E. Dean, D. P. Rojasc, S. Merler, D. Mistry, P. Poletti, L. Rossi, M. Braya, M. E. Hallorang, I. Longini, A. Vespignani
PNAS 114 ,22 (2017)

Onymity promotes cooperation in social dilemma experiments

Z. Wang, M. Jusup, R. Wang, L. Shi, Y. Iwasa, Y. Moreno, J. Kurths
Science Advances 3,3 e1601444 (2017)

Human mobility networks and persistence of rapidly mutating pathogens

A. Aleta, A. N. S. Hisi, S. Meloni, C. Poletto, V. Colizza, Y. Moreno
Royal Society Open Science (2017)

Participatory Syndromic Surveillance of Influenza in Europe

C. Guerrisi, C. Turbelin, T. Blanchon, T. Hanslik, I. Bonmarin, D. Levy-Bruhl, D. Perrotta, D. Paolotti, R. Smallenburg, C. Koppeschaar, A. O Franco, R. Mexia, J. Edmunds, R. Vasile, R. Pebody, E. van Straten, S. Meloni, Y. Moreno, J. Duggan, C. Kjelsø, V. Colizza
J Infect Dis. 214 (supp 4): S386-S392 (2016)

Recalibrating disease parameters for increasing realism in modeling epidemics in closed settings

L. Bioglio, M. Génois, C. Vestergaard, C. Poletto, A. Barrat, V. Colizza
BMC Infectious Diseases (2016)

Containing Ebola at the Source with Ring Vaccination

S. Merler, M. Ajelli, L. Fumanelli, S. Parlamento, A. Pastore Y Piontti, N. E. Dean, G. Putoto, D. Carraro, I. Longini, M. E. Halloran, A. Vespignani
PLoS Negl Trop Dis 10(11) (2016)

Asymptotic theory of time-varying social networks with heterogeneous activity and tie allocation

E. Ubaldi, N. Perra, M. Karsai, A. Vezzani, R. Burioni, A. Vespignani
Scientific Reports 6: 35724. (2016)

School closure policies at municipality level for mitigating influenza spread: a model-based evaluation

C. Ciavarella, L. Fumanelli, S. Merler, C. Cattuto, M. Ajelli
BMC Infectious Diseases — doi:10.1186/s12879-016-1918-z (2016)

Spatiotemporal dynamics of the Ebola epidemic in Guinea and implications for vaccination and disease elimination: a computational modeling analysis

M. Ajelli, S. Merler, L. Fumanelli, A. Pastore Y Piontti, N. E. Dean, I. Longini, M. E. Halloran, A. Vespignani
BMC Medicine 201614:130 (2016)

Real-Time Assessment of the International Spreading Risk Associated with the 2014 West African Ebola Outbreak

A. Pastore Y Piontti, Q. Zhang, M. F. C. Gomes, L. Rossi, C. Poletto, V. Colizza, D. Chao, I. Longini, M. E. Halloran, A. Vespignani
Mathematical and Statistical Modeling for Emerging and Re-emerging Infectious Diseases (2016)

Contact diaries versus wearable proximity sensors in measuring contact patterns at a conference: method comparison and participants’ attitudes

T. Smieszek, S. Castell, A. Barrat, C. Cattuto, P. J. White, G. Krause
BMC Infectious Diseases — doi:10.1186/s12879-016-1676-y (2016)

Impact of spatially constrained sampling of temporal contact networks on the evaluation of the epidemic risk

C. Vestergaard, E. Valdano, M. Génois, C. Poletto, V. Colizza, A. Barrat
European Journal of Applied Mathematics 27, 941 (2016)

Quantifying social contacts in a household setting of rural Kenya using wearable proximity sensors

M. Kiti, M. Tizzoni, T. M. Kinyanjui, D. C. Koech, P. K. Munywoki, M. Meriac, L. Cappa, A. Panisson, A. Barrat, C. Cattuto, J. Nokes
EPJ Data Science 20165:21 (2016)

The dynamics of information-driven coordination phenomena: A transfer entropy analysis

J. Borge-Holthoefer, N. Perra, B. Gonçalves, S. González-Bailón,, A. Arenas, Y. Moreno, A. Vespignani
Science Advances 2, 4 (2016)

Spatiotemporal spread of the 2014 outbreak of Ebola virus disease in Liberia and the eff ectiveness of non-pharmaceutical interventions: a computational modelling analysis

S. Merler, M. Ajelli, L. Fumanelli, M. F. C. Gomes, A. Pastore Y Piontti, L. Rossi, D. Chao, I. Longini, M. E. Halloran, A. Vespignani
Lancet Infect Dis 15,2 (2015)

Collective attention in the age of (mis)information

D. Moncanu, L. Rossi, Q. Zhang, M. Karsai, W. Quattrociocchi
Computers in Human Behaviors 51 Part B (2015)

Epidemic processes in complex networks

R. Pastor-Satorras, C. Castellano, P. Van Mieghem, A. Vespignani
Rev. Mod. Phys. 87, 3 (2015)

Supporting Epidemic Intelligence, Personalised and Public Health with advanced computational methods

J. Pita Costa, D. Paolotti, F. Fuart, P. Škraba, E. Belayeva, I. Novalija
Conference Paper : EM-Health Workshop-Zdravje Ljubljana (2015)

The Scaling of Human Contacts and Epidemic Processes in Metapopulation Networks

M. Tizzoni, K. Sun, D. Benusiglio, M. Karsai, N. Perra
Scientific Reports 5 15111 (2015)

Social Data Mining and Seasonal Influenza Forecasts: The FluOutlook Platform

Q. Zhang, C. Gioannini, D. Paolotti, N. Perra, D. Perrotta, M. Quaggiotto, M. Tizzoni, A. Vespignani
Lecture Notes in Computer Science 9286 (2015)

Predicting epidemic risk from past temporal contact data

E. Valdano, C. Poletto, A. Giovannini, D. Palma, L. Savini, V. Colizza
PLOS Computational Biology (2015)

Characterising two-pathogen competition in spatially structured environments

C. Poletto, S. Meloni, A. Van Metre, V. Colizza, Y. Moreno, A. Vespignani
Scientific Reports 5 (2015)

Combining High-Resolution Contact Data with Virological Data to Investigate Influenza Transmission in a Tertiary Care Hospital

N. Voirin, C. Payet, A. Barrat, C. Cattuto, N. Khanafer, C. Régis, B. Kim, B. Comte, J. Casalegno, B. Lina, P. Vanhems
Infection Control & Hospital Epidemiology (2015)

The economy of attention in the age of (mis)information

A. Bessi, A. Scala, L. Rossi, Q. Zhang, W. Quattrociocchi
Journal of Trust Management 1:12 (2014)

Association between Recruitment Methods and Attrition in Internet-Based Studies

P. Bajardi, D. Paolotti, A. Vespignani, K. Eames, S. Funk, J. Edmunds, C. Turbelin, M. Debin, V. Colizza, R. Smallenburg, C. Koppeschaar, A. Franco, V. Faustino, A. Carnahan, M. Rehn, F. Merletti, J. Douwes, R. Firestone, L. Richiardi
PLoS ONE 9 (12) (2014)

Effectiveness of 2012-2013 influenza vaccine against influenza-like-illness in general population: estimation in a French web-based cohort

M. Debin, V. Colizza, T. Blanchon, T. Hanslik, C. Turbelin, A. Falchi
Human Vaccine & Immunotherapeutics 10,3 (2014)

Local and regional spread of Chinkungunya fever in the Americas

S. Cauchemez, M. Ledrans, C. Poletto, P. Quenel, H. de Valk, V. Colizza, P. Y. Boëlle
Eurosurveillance 19 (2014)

Time varying networks and the weakness of strong ties

M. Karsai, N. Perra, A. Vespignani
Scientific Reports 4 (2014)

Assessing the impact of travel restrictions on international spread of the 2014 West African Ebola epidemic

C. Poletto, M. F. C. Gomes, A. Pastore Y Piontti, L. Rossi, L. Bioglio, D. Chao, I. Longini, M. E. Halloran, V. Colizza, A. Vespignani
Eurosurveillance 19 (2014)

Ebola: mobility data

M. E. Halloran, A. Vespignani, N. Bharti, L. Feldstein, K. Alexander, M. Ferrari, J. Shaman, J. Drake, T. Porco, J. Eisenberg, S. Del Valle, E. Lofgren, S. Scarpino, M. Eisenberg, D. Gao, J. Hyman, S. Eubank, I. Longini
Science 346(6208) (2014)

Damage detection via shortest-path network sampling

F. Ciulla, N. Perra, A. Baronchelli, A. Vespignani
Phys. Rev. E 052816 (2014)

Controlling Contagion Processes in Activity Driven Networks

S. Liu, N. Perra, M. Karsai, A. Vespignani
Phys. Rev. Lett. 112 (2014)

Assessing the International Spreading Risk Associated with the 2014 West African Ebola Outbreak

M. F. C. Gomes, A. Pastore Y Piontti, L. Rossi, D. Chao, I. Longini, M. E. Halloran, A. Vespignani
PLOS Currents Outbreaks (2014)

Internet-Based Epidemiology

L. Richiardi, C. Pizzi, D. Paolotti
Handbook of Epidemiology (2014)

Local and regional spread of chikungunya fever in the Americas

S. Cauchemez, M. Ledrans, C. Poletto, P. Quenel, H. de Valk, V. Colizza, P. Y. Boëlle
Eurosurveillance 19 (2014)

The representativeness of a European multi-center network for influenza-like-illness participatory surveillance

P. Cantarelli, M. Debin, C. Turbelin, C. Poletto, T. Blanchon, A. Falchi, T. Hanslik, I. Bonmarin, D. Levy-Bruhl, A. Micheletti, D. Paolotti, A. Vespignani, J. Edmunds, K. Eames, R. Smallenburg, C. Koppeschaar, A. O Franco, V. Faustino, A. Carnahan, M. Rehn, V. Colizza
BMC Public Health 14 (2014)

Mining Concurrent Topical Activity in Microblog Streams

Proceedings of the 4th workshop on \'Making Sense of Microposts\', World Wide Web Conference 2014 (2014)

On the Use of Human Mobility Proxies for Modeling Epidemics

M. Tizzoni, P. Bajardi, A. Decuyper, G. Kon Kam King, C. M. Schneider, V. Blondel, Z. Smoreda, M. C. González, V. Colizza
PLoS Comput Biol 10(7) (2014)

Determinants of Follow-Up Participation in the Internet-Based European Influenza Surveillance Platform Influenzanet

P. Bajardi, A. Vespignani, S. Funk, K. Eames, J. Edmunds, C. Turbelin, M. Debin, V. Colizza, R. Smallenburg, C. Koppeschaar, A. Franco, V. Faustino, A. Carnahan, M. Rehn, D. Paolotti
J Med Internet Res 16, 3 (2014)

Controlling Contagion Processes in Time-Varying Networks

N. Perra, S. Liu, M. Karsai, A. Vespignani
Bulletin of the APS, March Meeting 2014 59,1 (2014)

Metapopulation epidemic models with heterogeneous mixing and travel behaviour

A. Apolloni, C. Poletto, J. J. Ramasco, P. Jensen, V. Colizza
Theoretical Biology and Medical Modelling 11,3 (2014)

Web-based participatory surveillance of infectious diseases: the Influenzanet participatory surveillance experience

D. Paolotti, A. Carnahan, V. Colizza, K. Eames, J. Edmunds, G. Gomes, C. Koppeschaar, M. Rehn, R. Smallenburg, C. Turbelin, S. Van Noort, A. Vespignani
Clinical Microbiology and Infection 20 (2014)

Time-varying social networks in a graph database: a Neo4j use case

Proceeding GRADES \'13 First International Workshop on Graph Data Management Experiences and Systems Article No. 11 (2013)

Characterizing scientific production and consumption in Physics

Q. Zhang, N. Perra, B. Gonçalves, F. Ciulla, A. Vespignani
Scientific Reports 3 (2013)

Age-specific contacts and travel patterns in the spatial spread of 2009 H1N1 influenza pandemic

A. Apolloni, C. Poletto, V. Colizza
BMC Infectious Diseases 13:176 (2013)

Walking and searching in time-varying networks

N. Perra, A. Baronchelli, D. Moncanu, B. Gonçalves, R. Pastor-Satorras, A. Vespignani
American Physical Society 58 (2013)

The Twitter of Babel: Mapping World Languages through Microblogging Platforms

D. Moncanu, A. Baronchelli, N. Perra, B. Gonçalves, Q. Zhang, A. Vespignani
PLoS ONE 8 (2013)

Containing the accidental laboratory escape of potential pandemic influenza viruses

S. Merler, M. Ajelli, L. Fumanelli, A. Vespignani
BMC Medicine 11(1) (2013)

Immunization strategies for epidemic processes in time-varying contact networks

M. Starnini, T. Picard, A. Machens, C. Cattuto, A. Barrat, R. Pastor-Satorras
Journal of Theoretical Biology 337 (2013)

Diffusion dynamics with changing network composition

R. Baños, J. Borge-Holthoefer, N. Wang, Y. Moreno, S. González-Bailón
Entropy 15(11) (2013)

Host mobility drives pathogen competition in spatially structured populations

C. Poletto, S. Meloni, V. Colizza, Y. Moreno, A. Vespignani
PLoS Comput Biol 9(8): e1003169 (2013)

Estimating potential infection transmission routes in hospital wards using wearable proximity sensors

P. Vanhems, A. Barrat, C. Cattuto, J. Pinton, N. Khanafer, C. Régis, B. Kim, B. Comte, N. Voirin
PLoS ONE 8(9) (2013)

Beating the news using social media: the case study of American Idol

F. Ciulla, D. Moncanu, A. Baronchelli, B. Gonçalves, N. Perra, A. Vespignani
EPJ Data Science 1 (1) (2012)

Real-time numerical forecast of global epidemic spreading: case study of 2009 A/H1N1pdm

M. Tizzoni, P. Bajardi, C. Poletto, J. J. Ramasco, D. Balcan, B. Gonçalves, N. Perra, V. Colizza, A. Vespignani
BMC Medicine 10:165 (2012)

Optimizing surveillance for livestock disease spreading through animal movements

P. Bajardi, A. Barrat, L. Savini, V. Colizza
Journal of the Royal Society: Interface doi: 10.1098/rsif.2012.0289 (2012)

Inferring the Structure of Social Contacts from Demographic Data in the Analysis of Infectious Diseases Spread

L. Fumanelli, M. Ajelli, P. Manfredi, A. Vespignani, S. Merler
PLoS Computational Biology 8:e1002673 (2012)

Random walks on temporal networks

M. Starnini, A. Baronchelli, A. Barrat, R. Pastor-Satorras
Physical Review E 85 (2012)

On the usefulness of ontologies in epidemiology research and practice

J. Ferreira, D. Paolotti, F. M. Couto, M. J. Silva
The Journal of Epidemiology and Community Health 10.1136/jech (2012)

Rapid assessment of influenza vaccine effectiveness: analysis of an internet-based cohort

K. Eames, E. Brooks-Pollock, D. Paolotti, M. Perosa, C. Gioannini, J. Edmunds
Epidemiology and Infection, Available on CJO 140(7) (2012)

Assessing the ecotoxicologic hazards of a pandemic influenza medical response

A. Singer, V. Colizza, H. Schmitt, J. Andrews, D. Balcan, W. E. Huang, V. D. Keller, A. Vespignani, R. Williams
Environ Health Perspectives 119(8) (2011)

Properties and evolution of internet traffic networks from anonymized flow data

M. Meiss, F. Menczer, A. Vespignani
ACM Transactions on Internet Technology 10, 4 (2011)

Modeling Users\' Activity on Twitter Networks: Validation of Dunbar\'s Number

B. Gonçalves, N. Perra, A. Vespignani
PLoS ONE 6 (8) (2011)

Human Mobility Networks, Travel Restrictions, and the Global Spread of 2009 H1N1 Pandemic

P. Bajardi, C. Poletto, J. J. Ramasco, M. Tizzoni, V. Colizza, A. Vespignani
PLoS ONE 6(1): e16591 (2011)

Close encounters in a pediatric ward: measuring face-to-face proximity and mixing patterns with wearable radio frequency devices

W. Van den Broeck, V. Colizza, L. Ravà, L. Isella, F. Gesualdo, E. Pandolfi, C. Cattuto, A. E. Tozzi, A. Barrat, M. Romano, C. Rizzo
PLoS ONE 6(2), e17144 (2011)

Dynamical patterns of cattle trade movements

P. Bajardi, A. Barrat, F. Natale, L. Savini, V. Colizza
PLoS ONE 6(5): e19869 (2011)

Towards a Characterization of Behavior-Disease Models

N. Perra, D. Balcan, B. Gonçalves, A. Vespignani
PLoS ONE 6(8): e23084 (2011)

High-Resolution Measurements of Face-to-Face Contact Patterns in a Primary School

J. Stehlé, N. Voirin, A. Barrat, C. Cattuto, L. Isella, J. Pinton, M. Quaggiotto, W. Van den Broeck, C. Régis, B. Lina, P. Vanhems
PLoS ONE 6(8), e23176 (2011)

Complex networks: Patterns of complexity

R. Pastor-Satorras, A. Vespignani
Nature Physics 6-7 (2010)

Single aminoacidic mutations in meningococcal antigen fHbp have sizeable and predictable impact on its immunogenicity

D. Medini, A. Muzzi, D. Paolotti, D. Serruto, D. Brunelli, M. Comanducci, M. Guiliani, M. Scarselli, R. Rappouli, A. Covacci, M. Pizza
Proceedings of 17th International Pathogenic Neisseria Conference (2010)

Comparing large-scale computational approaches to epidemic modeling: agent-based versus structured metapopulation models

M. Ajelli, B. Gonçalves, D. Balcan, V. Colizza, H. Hu, J. J. Ramasco, S. Merler, A. Vespignani
BMC Infectious Diseases 10:190 (2010)

Internet-based monitoring system for infuenza-like illness: H1N1 surveillance in Italy

D. Paolotti, C. Gioannini, V. Colizza, A. Vespignani
Proceedings of eHealth 2010 Casablanca 13-15 December 2010 (2010)

Modeling the spatial spread of infectious diseases: The GLobal Epidemic and Mobility computational model

D. Balcan, B. Gonçalves, H. Hu, J. J. Ramasco, V. Colizza, A. Vespignani
Journal of Computational Science 1, 3 (2010)

Modeling the emergence of universality in color naming patterns

A. Baronchelli, T. Gong, A. Puglisi, V. Loreto
PNAS 107,6 (2010)

Estimate of Novel Influenza A/H1N1 cases in Mexico at the early stage of the pandemic with a spatially structured epidemic model

V. Colizza, A. Vespignani, N. Perra, C. Poletto, B. Gonçalves, H. Hu, D. Balcan, D. Paolotti, W. Van den Broeck, M. Tizzoni, P. Bajardi, J. J. Ramasco
Public Library of Science Currents: Influenza. RRN1129 (2009)

Seasonal transmission potential and activity peaks of the new influenza A(H1N1): a Monte Carlo likelihood analysis based on human mobility

D. Balcan, H. Hu, B. Gonçalves, P. Bajardi, C. Poletto, J. J. Ramasco, D. Paolotti, N. Perra, M. Tizzoni, W. Van den Broeck, V. Colizza, A. Vespignani
BMC Medicine 7:45 (2009)

Modeling the critical care demand and antibiotics resources needed during the Fall 2009 wave of influenza A(H1N1) pandemic

D. Balcan, V. Colizza, A. Singer, C. Chouaid, H. Hu, B. Gonçalves, P. Bajardi, C. Poletto, J. J. Ramasco, N. Perra, M. Tizzoni, D. Paolotti, W. Van den Broeck, A. Valleron, A. Vespignani
PLoS Curr.: Influenza 1133 (2009)

Modeling vaccination campaigns and the Fall/Winter 2009 activity of the new A(H1N1) influenza in the Northern Hemisphere

P. Bajardi, C. Poletto, D. Balcan, H. Hu, B. Gonçalves, J. J. Ramasco, D. Paolotti, N. Perra, M. Tizzoni, W. Van den Broeck, V. Colizza, A. Vespignani
Emerging Health Threats Journal 2:e11 (2009)

Multiscale mobility networks and the large scale spreading of infectious diseases

D. Balcan, V. Colizza, B. Gonçalves, H. Hu, J. J. Ramasco, A. Vespignani
PNAS 106,51 (2009)